User: CalM

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CalM0
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Posts by CalM

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DSS for non-CpG site analysis
... Hello, I'm running a bisulfite sequencing analysis on a plant genome, and I would like to know if the DSS (Dispersion Shrinkage for Sequencing data) package is suitable for analyzing non-CpG sites ? Thank you ! ...
dss methylation written 11 weeks ago by CalM0
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ChIPseeker TSS plot
... Hi,  I'm interested in using ChIPseeker to plot profiles of ChIP peaks binding to TSS regions on drosophila data.  The problem is when I'm modifying the TSS region (from -1kb to 2kb): the plot is showing 2 peaks at 0 (TSS position) and 1000 pb, instead of one unique peak corresponding to the TSS p ...
chipseeker plotavgprof written 2.9 years ago by CalM0 • updated 2.8 years ago by Guangchuang Yu1.1k

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