User: cjmb3

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cjmb30
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Posts by cjmb3

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Comment: C: RNA-seq paired analysis design
... Thanks a lot Gordon, it is much clearer now! ...
written 2.9 years ago by cjmb30
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Comment: C: RNA-seq paired analysis design
... Thanks Aaron, I'm going to tag some but the thing is (I think) the theory behind the design formula should be independent of the package (same principle whether you use limma or DESeq2 for example). ...
written 2.9 years ago by cjmb30
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RNA-seq paired analysis design
... Hello, I'm sorry if this is a recurrent question but the more I read the more I get confused! I have RNA-seq data from patients for which I have cells either "control" (CT) or "stimulated" (S). So for each patient, I have extracted a cell type and I'm comparing 2 treatments. If I want to analyze f ...
limma edger deseq2 design matrix paired samples written 2.9 years ago by cjmb30 • updated 2.9 years ago by Gordon Smyth39k

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