User: natalie.hull

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Syntax of DESeq2 contrast argument for all pairwise comparisons
... I'm trying to use DESeq2 to determine if an OTU is enriched by treatments from 16S rRNA sequence data.  I imported OTU counts for each library (otu), and metadata information for each library (meta).  One of my metadata columns is a factor with 5 levels (factors).  I want to do all pairwise comparis ...
deseq2 contrast matrix written 2.5 years ago by natalie.hull0 • updated 2.5 years ago by Michael Love25k

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