User: ferrato

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ferrato0
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Posts by ferrato

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Problem with the readFast5Summary command
... Hello, I have a problem with my set of fast5 files. When I run the readFast5Summary command I obtain this message error : Error opening: shares-net/sequencages/nanopore/fast5/FAD22491_20161011/uploaded/dnacpc14_20161011_FNFAD22491_MN17734_sequencing_run_run2_46863_ch128_read696_strand.fast5 - Fi ...
ioniser written 7 months ago by ferrato0 • updated 7 months ago by Mike Smith2.1k
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Answer: A: IONiseR readFast5Summary Error
... Thank you very much. It was a version problem. Now all works fine. ...
written 7 months ago by ferrato0
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Answer: A: IONiseR readFast5Summary Error
... For the files: https://drive.google.com/drive/folders/0B-dW0jY0Jr0COVNsTzlmYkRNSWs Here you are the output of sessionInfo(): R version 3.2.3 (2015-12-10) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 16.04.1 LTS locale: [1] LC_CTYPE=fr_FR.UTF-8 LC_NUMERIC=C [3] ...
written 7 months ago by ferrato0
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IONiseR readFast5Summary Error
... Hello, I'm trying to use ioniser with the function readFast5Summary  but a message error appears: fast5files <- list.files(path = "/home/ferrato/Documents/fast5", pattern = ".fast5$",full.names = TRUE) example.summary <- readFast5Summary(fast5files) Answer: Checking file validity Reading ...
ioniser written 7 months ago by ferrato0

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