User: Dmitry

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Dmitry0
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Posts by Dmitry

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Comment: C: DESeq2 model design with unequal number of time points
... Yes, I was considering to use time as a continuous variable. But since I am just starting learning bioinformatics, I am still not knowledgeable enogh to do this on my own:) Maybe I'll try if I find a good tutorial.  ...
written 8 months ago by Dmitry0
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Comment: C: DESeq2 model design with unequal number of time points
... Thank you for a possible solution, Ryan! I am going to try it. The reason I am keeping all the time points is to look for changes in gene expression within one condition. But of course, for comparison between all 3 conditions I am going to use only matching time points.  ...
written 8 months ago by Dmitry0
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DESeq2 model design with unequal number of time points
...   Dear community,  I am having troubles with the DESeq2 analysis of time course experiments and was thinking someone could point me to the right direction.  I have 3 different conditions. For conditions 1 and 2 there are time points 0, 8, 16, 24, 48, 72 hours. For condition 3 there are time point ...
deseq2 R multiple time points written 8 months ago by Dmitry0 • updated 8 months ago by Ryan C. Thompson6.1k

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