User: tscharschmidt

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Posts by tscharschmidt

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Comment: C: DESeq2 download errors R3.3.3 OS10.5.5
... I just attempted:  BiocInstaller::biocLite("GenomicRanges") BiocInstaller::biocLite("GenomicInfoDb") But got the following error. I'm confused because I recently installed DESeq2 on another Mac in R version 3.3.3 so seems odd.  BioC_mirror: https://bioconductor.org Using Bioconductor 3.4 (B ...
written 10 months ago by tscharschmidt0
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Comment: C: DESeq2 download errors R3.3.3 OS10.5.5
... Martin, Thanks very much the chooseCRANmirror() option allowed me to install. I was given the option to install from sources that required compilation, which I declined, and the option to update certain packages which I did. It seemed to complete fine but when I went to load DESeq2 with library(DE ...
written 10 months ago by tscharschmidt0
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DESeq2 download errors R3.3.3 OS10.5.5
... I'm a relatively novice R user - mainly using it to analyze RNAseq data. I recently updated my R version via an uninstall/re-install and now can no longer get DESeq2 to install or run properly. When trying to install with > source("https://bioconductor.org/biocLite.R") > biocLite("DESeq2") ...
deseq2 R bioconductor written 10 months ago by tscharschmidt0 • updated 10 months ago by Martin Morgan ♦♦ 21k

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