User: nathaniellegall

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Posts by nathaniellegall

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Answer: A: Problem with readFast5Summary in IONiseR related to HDF5
...   I restarted the system and the readFast5Summary appears to work fine now on test data for another package. Maybe the HDF5 update needed the system to restart before it kicked in. > fast5files <- list.files(path = "/Users/NLsMacBook/Documents/poretools-pfaucon/test_data", pattern = ".fast5$ ...
written 7 months ago by nathaniellegall0
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Problem with readFast5Summary in IONiseR related to HDF5
... I'm having a bit of trouble running the 'readFAST5Summary' function in IONiseR. The error message mentions HDF5 so I have updated these in the command line using home-brew; brew install hdf5 pip3 install h5py and tried to run the code again but it gives me this error message.  > fast5files &l ...
bioinformatics minion ioniser written 7 months ago by nathaniellegall0 • updated 9 weeks ago by Lescai, Francesco370

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