User: grashow

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grashow0
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Posts by grashow

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Comment: C: Fundamental questions about DESeq2 and RUVs in targeted gene set of 500
... Davide and Mike, Thank so much for these answers. You're right that there are no spike-in or housekeeping genes. According to a colleague, this is because our vendor uses an approach where an equal amount of RNA from each sample prior to sequencing. So their sequencing results in absolute counts of ...
written 2.4 years ago by grashow0
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Fundamental questions about DESeq2 and RUVs in targeted gene set of 500
... Hi, I am brand new to bioinformatics and differential expression analysis, trying to assimilate a lot of new technical and conceptual information. I am working with a dataset that used BioSpyder’s TempO-seq technology to analyze a cancer cell line using a targeted gene set of 500, where 10 chemical ...
deseq2 ruvseq written 2.4 years ago by grashow0 • updated 2.4 years ago by davide risso830

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