User: ezrabekele17

gravatar for ezrabekele17
Reputation:
0
Status:
New User
Location:
Last seen:
4 months, 1 week ago
Joined:
5 months, 2 weeks ago
Email:
e***********@gmail.com

Posts by ezrabekele17

<prev • 5 results • page 1 of 1 • next >
0
votes
1
answers
109
views
1
answers
Comment: C: Minfi returning incorrect beta values
... Do you think the beta values I'm getting now are more accurate and that I should just continue using the code of the newer minfi version? ...
written 4 months ago by ezrabekele170
1
vote
1
answer
109
views
1
answer
Minfi returning incorrect beta values
... I'm trying to link GEOquery and minfi. Specifically I want to obtain beta values from the idat files on GEOquery. I was following this guide: https://kasperdanielhansen.github.io/genbioconductor/html/minfi.html, up until the preprocessing part. Meaning that I was able to obtain the RGset. Then I us ...
minfi illumina methylation R illumina450k written 4 months ago by ezrabekele170
0
votes
1
answers
124
views
1
answers
Answer: A: esearch in reutils package: how to specify dataset?
... I figured out you have to set the database as "gds". ...
written 5 months ago by ezrabekele170
1
vote
1
answer
124
views
1
answer
esearch in reutils package: how to specify dataset?
... Hello! I have a question about the reutils package. There is a function called esearch() which allows you to search the GEO database. So, I entered the same query that I would use in GEO: "UIDs<-esearch( term = "METHYLATION PROFILING BY ARRAY[DATASET TYPE]"), but esearch() doesn't recognize "DA ...
R written 5 months ago by ezrabekele170
0
votes
1
answer
118
views
1
answer
efetch result not in character format
... Hi, I want to use reutils to obtain the accession numbers of a query search in character format. When I use efetch, the accession number isn't in a character format, and I'm not sure if the number is accurate, because I get the error: Error in file.exists(destfile) : object 'destfile' not found T ...
R written 5 months ago by ezrabekele170 • updated 5 months ago by James W. MacDonald45k

Latest awards to ezrabekele17

Scholar 5 months ago, created an answer that has been accepted. For A: esearch in reutils package: how to specify dataset?

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 134 users visited in the last hour