User: Shrule

gravatar for Shrule
Shrule0
Reputation:
0
Status:
New User
Location:
Last seen:
3 months, 4 weeks ago
Joined:
5 months ago
Email:
g***********@gmail.com

Posts by Shrule

<prev • 2 results • page 1 of 1 • next >
0
votes
0
answers
172
views
0
answers
Comment: C: Converting Exon counts(co-ordinates) to transcript/gene ids
... Probably should have mentioned, the reason I'm working with exon level data is that I'm looking at a novel transcript, I have the chr co-ordinates for the novel transcript so the idea was to annotate the gtf file with the novel transcript and use DexSeq to look at expression levels.  ...
written 5 months ago by Shrule0
0
votes
0
answers
172
views
0
answers
Converting Exon counts(co-ordinates) to transcript/gene ids
... Hi, I have a question regarding the input data into DExSeq. I'm working with level 3 TCGA exon_quantification data which looks likes this: Hybridization REF TCGA-3C-AAAU-01A-11R-A41B-07 TCGA-3C-AALI-01A-11R-A41B-07 TCGA-3C-AALJ-01A-31R-A41B-07 exon raw_counts raw_counts raw_counts raw_counts chr ...
cancer dexseq bioconductor rna-seq written 5 months ago by Shrule0

Latest awards to Shrule

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 216 users visited in the last hour