User: zwfanwz678

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zwfanwz6780
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Posts by zwfanwz678

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biostrings report "XStringSet object is too big to be unlisted" error
... hello everone, I using Biostrings::readDNAStringSet to cut some sequence from hg19.fa, but an error occurs when I run the program(as follows). seq <- Biostrings::readDNAStringSet("hg19.fa") genome <- GenomeInfoDb::Seqinfo(genome = NA_character_) gr_a <- BiocGenerics::unstrand(rtracklayer: ...
biostrings written 3 months ago by zwfanwz6780
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why merged paired end reads still have strand infomation?
... hello! I using package rtracklayer to processing some paired end reads. using export function, I can convert my data to bed format, but there is a question confused me. I using bedtools bamtobed function to convert bam file to bed file, the output are as follows: chr10 29334602 29334652 SRR89127 ...
dnaseq rtracklayer paired-end reads written 4 months ago by zwfanwz6780
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can not depends QuasR in another package
... hello. I want to use QC function in QuasR in my packages, but when I run devtools::document(), it report a warning like below. Warning message: no function found corresponding to methods exports from ‘QuasR’ for: ‘genome’    I think that's because "genome" do not have @export. I read this page ...
quasr written 4 months ago by zwfanwz6780

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