User: Luisa672

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Luisa6720
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Posts by Luisa672

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Comment: C: Analysing TCGA Level 3 Copy Number Data Location of markers in the genome
... Thank you very much for your answer! What I initially wanted was to create a struct with the locations of the markers in the rows and the log values  in the columns (with each column corresponding to each patient). What I can't understand is how I get the locations, since for each patient I have tw ...
written 2.4 years ago by Luisa6720
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Analysing TCGA Level 3 Copy Number Data Location of markers in the genome
... I have downloaded copy number alterations data from TCGA for Head and Neck cancer. I wanted to use the DNAcopy package and I need to create a CNA object (as described on the reference manual), however my data has both starts and ends which are different for each patient... I do not understand how to ...
cancer dnacopy tcga segmentation written 2.4 years ago by Luisa6720 • updated 2.4 years ago by markus.riester110

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