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Posts by dbouzo
... Hi all, I am conducting some RNA-Seq experiments to determine differentially expressed genes after treatment with various antimicrobials. I have used RUVSeq to remove a batch effect present in my data set and DESeq2 to estimate differential expression. I used the EDASeq::plotPCA function on the S ...
... Hi all, I am a microbiology grad student new to bioinformatics, conducting some RNA-Seq experiments to determine differentially expressed genes after antimicrobial treatment. I have an untreated control and 4 different antimicrobial treatments all conducted on the same cell type/microorganism with ...
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