User: R.S.

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R.S.0
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Posts by R.S.

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Comment: C: arrayQualityMetrics: "All SVG style attribute must have length 1" and other erro
... Mike you are correct, I restarted R Studio and cleared my workspace, the actual error is: Error in file.info(x) : invalid filename argument arrayQualityMetrics produces the output folder and the following files: heatmap (hm), outlier heatmap (out hm), index, .css, .js before this error is produce ...
written 11 weeks ago by R.S.0
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Comment: C: Limma toptable interpretation check
... Just to clarify, your lfc is redundant because you set lfc = log2(1) = 0, which is the default and imposes no fold change thresholds on your results, so you are only selecting based on adj. p-values. A fold change of 2 as you indicated would be lfc = 1, but see warning in ?topTable on setting p-val ...
written 3 months ago by R.S.0
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Comment: C: arrayQualityMetrics: "All SVG style attribute must have length 1" and other erro
... Hi Wolfgang,  It looks like the error: "Only one 'gridsvg' device may be used at a time" has re-emerged for the most current versions: gridSVG_1.5-1, arrayQualityMetrics_3.32.0 on R version 3.4.1. I am only able to produce the following files: heatmap (hm), outlier heatmap (out hm), index, .css, . ...
written 3 months ago by R.S.0

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