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Posts by Alexandra
Comment: C: Annotate gene counts
... Hi, Thank you for your reply and for correcting the tags. I was aware that my keys were in a different format (or so I think)- e.g. "transcript:F31C3.9" instead of something like "B0240b". My problem is not being able to add Entrez Gene IDs to the DeSeq object. The initial raw count table I pass t ...
... Hi, I am trying to analyse and RNASeq data set using DeSeq2. I would like to have the annotated genes in heat maps and also for making a HTML report using ReportingTools, but I am not sure how to pass an already annotated matrix to DESeqDataSetFromMatrix() or how to annotate the results after I ...
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