User: robert_w_link

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Posts by robert_w_link

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replacement has X rows, data has Y rows
... Hello, I have been using CRISPRseek for a while now, and it has been incredibly useful for my research. However, an error has been coming up recently for some of my query searches (looking for off-target effects of gRNA templates). When using the following input: offTargetAnalysis(inputFile ...
crisprseek written 7 months ago by robert_w_link0
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Interpretation of Score vs gRNA efficacy
... Hello, I downloaded CRISPRseek a while ago and find it to be a wonderfully useful tool! I primarily utilize it to find predicted off-target effects of created gRNAs (just to provide some context for the question). When looking at the Off-target results output files, I find two quantifiable predict ...
crisprseek written 10 months ago by robert_w_link0
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Comment: C: offTargetAnalysis() Error in weights %*% mismatch.pos : non-conformable argument
... Thank you, Julie! Updating CRISPRSeek fixed the issue. The gRNAs are not human sequences, so that would make sense. ...
written 12 months ago by robert_w_link0
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offTargetAnalysis() Error in weights %*% mismatch.pos : non-conformable arguments (CRISPRSeek)
... Hello, I recently downloaded CRISPRSeek and I got the tests to work in the vignette (specifically Scenario 5: Target and off-target analysis for user specified gRNAs) and the output looks wonderful. When I tried to replicate the results with a test file on my own, however, I got the error as descri ...
crisprseek written 12 months ago by robert_w_link0 • updated 12 months ago by Julie Zhu3.8k

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