User: khandarius

gravatar for khandarius
khandarius20
Reputation:
20
Status:
New User
Location:
Last seen:
6 months ago
Joined:
1 year, 7 months ago
Email:
k*********@gmail.com

Posts by khandarius

<prev • 4 results • page 1 of 1 • next >
0
votes
1
answer
237
views
1
answers
Comment: C: limma barcodeplot(): calculation of enrichment score
... Thank you Gordon. I don't know how I missed this post... ...
written 6 months ago by khandarius20
4
votes
1
answer
237
views
1
answer
limma barcodeplot(): calculation of enrichment score
... Hello,   I've performed gene set enrichment analysis with the limma-package's camera -function. I'm using limma's barcodeplot -function to visualize my results (one index set, no gene weights). I would like to know how the enrichment score on the plot (y-axis) is calculated - I can't find any ment ...
limma gene set enrichment analysis written 6 months ago by khandarius20 • updated 6 months ago by Aaron Lun23k
2
votes
1
answer
254
views
1
answer
MAST: testing differential expression with a nested factorial design
... Hello MAST team, I would like to use MAST for testing differential expression between cells from two treatment groups. The data is from a nested factorial design, and I would like to know how to best take the structure of the data into account. Each of the two treatment groups have cells from thre ...
rna-seq single-cell mast written 12 months ago by khandarius20 • updated 12 months ago by Andrew_McDavid190
0
votes
0
answers
1.8k
views
0
answers
Comment: C: Bioconductor version too old
... Hi, I have the exact same problem with R 3.4.2 on Ubuntu16.04 LTS. I've tried all suggested solutions. Any ideas for correcting this? My sessionInfo(): R version 3.4.2 (2017-09-28) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 16.04.2 LTS Matrix products: default BLAS: /usr/lib/ ...
written 17 months ago by khandarius20

Latest awards to khandarius

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 163 users visited in the last hour