User: khandarius

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khandarius10
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Posts by khandarius

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MAST: testing differential expression with a nested factorial design
... Hello MAST team, I would like to use MAST for testing differential expression between cells from two treatment groups. The data is from a nested factorial design, and I would like to know how to best take the structure of the data into account. Each of the two treatment groups have cells from thre ...
rna-seq single-cell mast written 3 months ago by khandarius10 • updated 12 weeks ago by Andrew_McDavid130
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Comment: C: Bioconductor version too old
... Hi, I have the exact same problem with R 3.4.2 on Ubuntu16.04 LTS. I've tried all suggested solutions. Any ideas for correcting this? My sessionInfo(): R version 3.4.2 (2017-09-28) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 16.04.2 LTS Matrix products: default BLAS: /usr/lib/ ...
written 8 months ago by khandarius10

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