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Comment: Comment: DESeq2 output used for PCA plot on R studio
4 hours ago swbarnes2 ★ 1.3k
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337
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Comment: Comment: DESEQ2 Batch Effect
7 weeks ago swbarnes2 ★ 1.3k
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1
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531
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Comment: Comment: Deseq2 Coefficients from resultsNames() not reflecting all coefficient possibili
12 weeks ago swbarnes2 ★ 1.3k
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1
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531
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Comment: Comment: Deseq2 Coefficients from resultsNames() not reflecting all coefficient possibili
3 months ago swbarnes2 ★ 1.3k
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1
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804
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Comment: Comment: DESeq2 Normalization with 4 Groups
6 months ago swbarnes2 ★ 1.3k
1
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0
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760
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Comment: Comment: Two factor design including interaction effect with DESeq2 in R
6 months ago swbarnes2 ★ 1.3k
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0
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836
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Comment: Comment: DESeq2: Design model includes sex but only one female
6 months ago swbarnes2 ★ 1.3k
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406
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Comment: Comment: Issues with ddseq2 for treatment response factoring in different KO clones
6 months ago swbarnes2 ★ 1.3k
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0
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641
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Comment: Comment: How to use contrast with multiple treatments?
7 months ago swbarnes2 ★ 1.3k
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1
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641
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Comment: Comment: How to use contrast with multiple treatments?
7 months ago swbarnes2 ★ 1.3k
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0
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846
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Comment: Comment: Handle zero effective gene length when tximport RSEM results
7 months ago swbarnes2 ★ 1.3k
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1
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1.4k
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Comment: Comment: PCA percent variance DESeq2
7 months ago swbarnes2 ★ 1.3k
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1
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1.4k
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Comment: Comment: PCA percent variance DESeq2
8 months ago swbarnes2 ★ 1.3k
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0
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1.3k
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Comment: Comment: Question about RNAseq analysis in EdgeR to identify common and donor specific di
9 months ago swbarnes2 ★ 1.3k
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0
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767
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Comment: Comment: DESeq2 design formula
9 months ago swbarnes2 ★ 1.3k
1
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607
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Comment: Comment: DESeq2 on multilevel design variable
10 months ago swbarnes2 ★ 1.3k
0
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0
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771
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Comment: Comment: Error: biomaRt has encountered an unexpected server error.
11 months ago swbarnes2 ★ 1.3k
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935
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Comment: Comment: Subsetting DESeq data set to compare treatments within one group (multi-group ex
11 months ago swbarnes2 ★ 1.3k
0
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0
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499
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Comment: Comment: DESeq2 with temporal data and different treatments
13 months ago swbarnes2 ★ 1.3k
0
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1
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743
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Comment: Comment: How do I design my DESEQ experiment?
13 months ago swbarnes2 ★ 1.3k
0
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0
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905
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Comment: Comment: Error running DESeq2 on longitudinal data: Error in checkFullRank(modelMatrix)
15 months ago swbarnes2 ★ 1.3k
0
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1
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905
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Comment: Comment: Error running DESeq2 on longitudinal data: Error in checkFullRank(modelMatrix)
15 months ago swbarnes2 ★ 1.3k
0
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1
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844
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Comment: Comment: Gene TPM validity with STAR only quantification
16 months ago swbarnes2 ★ 1.3k
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712
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Comment: Comment: what could be the source of this erro
16 months ago swbarnes2 ★ 1.3k
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1
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712
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Comment: Comment: what could be the source of this erro
16 months ago swbarnes2 ★ 1.3k
0
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0
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505
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Comment: Comment: checkFullRank(modelMatrix) while neither factor can be predicted from each other
16 months ago swbarnes2 ★ 1.3k
2
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962
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Comment: Comment: Rlog performed on tpm or raw transcript abundances?
16 months ago swbarnes2 ★ 1.3k
0
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0
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1.9k
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Comment: Comment: FeatureCounts: Low assigned reads, can I proceed? Do I need to do another pre-pr
16 months ago swbarnes2 ★ 1.3k
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0
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1.9k
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Comment: Comment: countToFPKM and featureLength
16 months ago swbarnes2 ★ 1.3k
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1
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1.9k
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Comment: Comment: countToFPKM and featureLength
16 months ago swbarnes2 ★ 1.3k
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1
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1.9k
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Comment: Comment: countToFPKM and featureLength
16 months ago swbarnes2 ★ 1.3k
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1
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1.9k
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Comment: Comment: countToFPKM and featureLength
16 months ago swbarnes2 ★ 1.3k
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0
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1.8k
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Comment: Comment: Is it possible to convert "DESeq2's normalized counts" to "DEGs"?
16 months ago swbarnes2 ★ 1.3k
0
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0
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834
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Comment: Comment: Remove low-expressed genes in DESeq2?
17 months ago swbarnes2 ★ 1.3k
0
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0
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694
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Comment: Comment: DESeq2 says my sampleinfo has linear combination error but I don't see it...
17 months ago swbarnes2 ★ 1.3k
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2
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1.3k
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Comment: Comment: why there are read counts in the gene knock out rat RNA-seq data
17 months ago swbarnes2 ★ 1.3k
0
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1
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792
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Comment: Comment: RNA-seq analysis between a wildtype vs a double microRNA kockout mouse brain
18 months ago swbarnes2 ★ 1.3k
0
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0
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2.1k
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Comment: Comment: t.test to determine the P-value in DESeq2
18 months ago swbarnes2 ★ 1.3k
0
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1
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968
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Comment: Comment: disappearing of DEGs genes by adjusting P-value < 0.05
18 months ago swbarnes2 ★ 1.3k
0
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1
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2.1k
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Comment: Comment: t.test to determine the P-value in DESeq2
18 months ago swbarnes2 ★ 1.3k
0
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1
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2.1k
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Comment: Comment: t.test to determine the P-value in DESeq2
18 months ago swbarnes2 ★ 1.3k
0
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0
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1.8k
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Comment: Comment: How to sort SAM file
18 months ago swbarnes2 ★ 1.3k
0
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1
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759
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Comment: Comment: Running DESeq2 on viral infection without control/host data
18 months ago swbarnes2 ★ 1.3k
0
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1
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828
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Comment: Comment: I have a problem when I run DESeq2 with one variable with 8 levels, I can't find
18 months ago swbarnes2 ★ 1.3k
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0
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1.8k
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Comment: Comment: How to sort SAM file
18 months ago swbarnes2 ★ 1.3k
1
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0
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1.7k
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Comment: Comment: Different results between Limma and DESEQ2 for Differential Expression Analysis
19 months ago swbarnes2 ★ 1.3k
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1
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1.7k
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Comment: Comment: Different results between Limma and DESEQ2 for Differential Expression Analysis
19 months ago swbarnes2 ★ 1.3k
0
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1
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4.2k
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Comment: Comment: Understanding the Log2FoldChange calculated with DESeq2 and according to formula
19 months ago swbarnes2 ★ 1.3k
0
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0
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1.6k
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Comment: Comment: DESeq2 contrasts using all relevant samples vs all samples
20 months ago swbarnes2 ★ 1.3k
0
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0
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961
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Comment: Comment: Time course RNA seq with DESeq2
20 months ago swbarnes2 ★ 1.3k
197 results • Page 1 of 4
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