User: Mahtetie

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Mahtetie0
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Bioinformatics and system biology

Posts by Mahtetie

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DESeq2, no replicate
... Hello, I'm working on a RNAseq dataset with two passages and no replicate! the STAR-HTSeq output with any of: dds <- DESeq(ddsHTSeq) dds <- DESeq(ddsHTSeq, minReplicatesForReplace=Inf, betaPrior=T, modelMatrixType="expanded") dds <- DESeq(ddsHTSeq, betaPrior=T, modelMatrixType="expanded ...
deseq2 no replicates high p-adj values written 6 weeks ago by Mahtetie0 • updated 6 weeks ago by johnmcma10

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