User: Mahtetie

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Mahtetie0
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DESeq2, no replicate
... Hello, I'm working on a RNAseq dataset with two passages and no replicate! the STAR-HTSeq output with any of: dds <- DESeq(ddsHTSeq) dds <- DESeq(ddsHTSeq, minReplicatesForReplace=Inf, betaPrior=T, modelMatrixType="expanded") dds <- DESeq(ddsHTSeq, betaPrior=T, modelMatrixType="expanded ...
deseq2 no replicates high p-adj values written 23 months ago by Mahtetie0 • updated 23 months ago by johnmcma10

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Popular Question 22 months ago, created a question with more than 1,000 views. For DESeq2, no replicate

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