User: zhangqshxxzz

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Posts by zhangqshxxzz

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Comment: A: QUESTION: How to get UCSC url when use rtracklayer, contain the track in the ur
... region<-c("chr2:240029740-240037011") session <- browserSession() genome(session) <- "hg19" export(region, "Track12.bed") restoredTrack2 <- import("Track12.bed") track(session, "Track") =  restoredTrack2 browserView(session,restoredTrack2*-10,hide=c("UCSC Genes","GTEx Gene","ENCODE Regul ...
written 10 months ago by zhangqshxxzz0
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How to get UCSC url when use rtracklayer, contain the track in the url ,it may be very useful
... Dr Michael Lawrence: Hellp, I use the rtracklayer to product the UCSC show with track, it work very well. But if the aim region are too much, is there have a option can direct get the UCSC url with the track, not the opened HTML........ It will very convenience to annotation the region file in bat ...
rtracklayer ucsc ucsctrack written 10 months ago by zhangqshxxzz0 • updated 10 months ago by James W. MacDonald48k
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Answer: A: The track cannot show in UCSC
... Oh oh oh, that's the reason,  It's no wonder that cannot be achieved.  Yes, thank you very much, I will wait it, very thanks ^_^!!  ...
written 12 months ago by zhangqshxxzz0
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The track cannot show in UCSC
... Dear doctor:   I try to use the rtracklayer package to interact with UCSC to show the CNV track, but when I follow the guide from web and tutorial , I really get the UCSC show webpage, but in the webpage, the track cannot show. the code I use like this: library(rtracklayer) session = browserSes ...
rtracklayer written 12 months ago by zhangqshxxzz0

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