User: zhangqshxxzz

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Posts by zhangqshxxzz

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Comment: A: QUESTION: How to get UCSC url when use rtracklayer, contain the track in the ur
... region<-c("chr2:240029740-240037011") session <- browserSession() genome(session) <- "hg19" export(region, "Track12.bed") restoredTrack2 <- import("Track12.bed") track(session, "Track") =  restoredTrack2 browserView(session,restoredTrack2*-10,hide=c("UCSC Genes","GTEx Gene","ENCODE Regul ...
written 6 weeks ago by zhangqshxxzz0
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How to get UCSC url when use rtracklayer, contain the track in the url ,it may be very useful
... Dr Michael Lawrence: Hellp, I use the rtracklayer to product the UCSC show with track, it work very well. But if the aim region are too much, is there have a option can direct get the UCSC url with the track, not the opened HTML........ It will very convenience to annotation the region file in bat ...
rtracklayer ucsc ucsctrack written 6 weeks ago by zhangqshxxzz0 • updated 6 weeks ago by James W. MacDonald45k
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Answer: A: The track cannot show in UCSC
... Oh oh oh, that's the reason,  It's no wonder that cannot be achieved.  Yes, thank you very much, I will wait it, very thanks ^_^!!  ...
written 3 months ago by zhangqshxxzz0
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The track cannot show in UCSC
... Dear doctor:   I try to use the rtracklayer package to interact with UCSC to show the CNV track, but when I follow the guide from web and tutorial , I really get the UCSC show webpage, but in the webpage, the track cannot show. the code I use like this: library(rtracklayer) session = browserSes ...
rtracklayer written 3 months ago by zhangqshxxzz0

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