User: ahmed.elewa

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ahmed.elewa20
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New User
Location:
Karolinska Institute
Twitter:
@filanboob
Last seen:
1 week, 2 days ago
Joined:
3 weeks, 5 days ago
Email:
a**********@ki.se

Posts by ahmed.elewa

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Comment: C: SC3 gene clusters
... Excellent! Thanks Vlad. AE ...
written 26 days ago by ahmed.elewa20
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Comment: C: SC3 gene clusters
... Hi Vlad, Thanks for your reply. I'm interested in interrogating the dendogram on the left when I use the command sc3_plot_expression(sceset, k = N). The top dendogram is for the cells, but what is the dendogram on the left?  5.3 Expression Matrix The expression panel represents the original input ...
written 26 days ago by ahmed.elewa20
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SC3 gene clusters
... Greetings,  SC3 provides an expression matrix after clustering genes by kmeans with k = 100. How does one extract the cluster to which each gene was clustered? I checked the features data (fData) but this data isn't included. Oddly, the column sc3_N_markers_clusts has numbers ranging from 1 to N, w ...
single cell tutorial single-cell sc3 written 26 days ago by ahmed.elewa20 • updated 26 days ago by Martin Morgan ♦♦ 20k

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