User: zhongjixx

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Calling differential peaks from ATAC-seq data using DEseq2
...   Hi all, Recently I am trying to call differential peaks using DEseq2. I have got ATAC-seq data for 10 samples  (5 time points and each time point has 2 replicates). Here is the workflow I trying to establish: 1) Call peaks using MACS2 2) Count the number of reads for each peak in each sample s ...
deseq2 atac-seq written 24 months ago by zhongjixx0 • updated 24 months ago by Rory Stark2.9k

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Popular Question 23 months ago, created a question with more than 1,000 views. For Calling differential peaks from ATAC-seq data using DEseq2

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