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Posts by gasta88
... Thanks for the reply Rory. To address the issues separately: I apology for the misunderstanding in my first question. The approach that you described is exactly what my colleague has done in calculating the consensus and counting peaks. Here is the original script launched on our cluster: peakset ...
... Hello, I'm carrying on part of a ChIP-Seq differential analysis for the first time. I have 6 replicates and 3 conditions; in each condition the first 3 replicates have been run separately from the other 3. I have a couple of questions: 1) In the analysis, the consensus profile is calculated like ...
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