User: staceyborrego

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Posts by staceyborrego

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Comment: C: Incorporating RUVSeq factors of unwanted variation in DESeq2 time course analysi
... Hi Davide, Thank you so much for your thorough response! I definitely want to identify strain specific trends but you are right that I should test additional reduced models as well. This is a big help and I feel more confident moving forward now.  Best, Stacey ...
written 17 months ago by staceyborrego20
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Incorporating RUVSeq factors of unwanted variation in DESeq2 time course analysis
... Hi!  This is my first post here and I'm new to all of this in general, so I hope I can do this correctly!  I have a specific question about incorporating the results from RUVSeq(specifically RUVg) into the time series analysis of DESeq2. My RNASeq experiment is a time course (4 points) of two dif ...
deseq2 ruvseq time course spike-in time series written 17 months ago by staceyborrego20 • updated 17 months ago by davide risso830

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