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Posts by egeulgen
... Hello, Thank you for your interest. It seems that you have duplicate genes in the input. We keep the lowest p value in such situations. Try the following: input.2hr_updated <- input.2hr[order(input.2hr$PValue, decreasing = FALSE), ] input.2hr_updated <- input.2hr_updated[!duplicated(input.2hr_ ...
... Hi all, I would like to introduce our group's pathway enrichment package to you: pathfindR This tool is designed to improve pathway enrichment analysis by firstly identifying active subnetworks in differential expression/methylation data using a protein-protein interaction network. It then perfo ...
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