User: W. Gi

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W. Gi0
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Posts by W. Gi

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More significant candidates and more skewed to the left why using more samples, why?
... Dear colleagues, Please help me! I was using DESeq2 to analyze gene expression from a batch of IPSCs and have observed some results that I can't explain. The study design was that there were 3 iPSCs derived from skin biopsy from patient A with Mutation X, and other 3 iPSCs from patient B with Mut ...
deseq2 written 10 months ago by W. Gi0 • updated 10 months ago by Michael Love26k
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How to use TRT function of DEXSeq in svn? How to use TRT function of DEXSeq in R?
... Dear All,   Could anyone please explain how to use the TRT function of DEXSeq, either in svn or in R? I have a 59 libraries and everytime I use the regular R code to estimate dispersion, the calculation crashes because the memory is 100% used....../______\ If you could help me, I would highly ap ...
rnaseq dexseq written 22 months ago by W. Gi0
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DEXSeq showing error with .bam files from HISAT
... Dear all, I was trying to process RNASeq data with DEXSeq and attempt to transform the .bam file generated by HISAT into a DEXSeq required .txt file with the following code. However this error message keeps showing. Could someone tell me what I should do and/or what more information I should provid ...
rnaseq dexseq hisat written 23 months ago by W. Gi0

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