User: torgeirous

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torgeirous0
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Posts by torgeirous

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Help with creating tumor cell line network
... I'm developing and testing some algorithms that scores drug combinations based on how they disrupt the topology of a network. To be able to compare results and look for correlation I will compare my algorithms with data from the  NCI Almanac that has data on approximately 5000 drug combinations on t ...
network nci written 9 days ago by torgeirous0
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Interpreting Affymetrix Human Genome U133 Plus 2.0 samples
... Hi, I have some gene expression data of the NCI-60 cell-lines from GEO that generated with the Affymetrix Human Genome U133 Plus 2.0 chip. I want to build a protein interaction network from 3 samples of a specific cell-line and so far I have done this in two steps: Mapped probe-IDs to gene symbol an ...
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Help with generating network from gene expression data
... Hi, I'm struggling to figure out how to go from gene expression data to  be able to create a network out of the most expressed genes in a cell line. Ok, I have developed an application for Cytoscape where I want to compare my analysis with research on the NCI-60 cell lines. My goal is to do these st ...
network gene expression cytoscape written 5 months ago by torgeirous0

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