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Posts by bn3301
... I am using DESeq2 to analyse RNA seq data. I have 5 conditions each with two replicates and I am comparing these against controls again with 2 replicates. However the issue is that one of control replicates was sequenced earlier. Thus only this control replicate belongs to a different batch from al ...
... I am using DESeq2 to estimate fold changes between two conditions neither of which have any replicates. Will it be of any utility to use log2fold shrunken changes over the non-shrunken ones in this case? ...
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