User: blastzone.heimerdinger

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Posts by blastzone.heimerdinger

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Using DADA2 output for DESeq2
... Hello, sir. I have a question regarding using microbiome dataset for DESeq2. I used DADA2 and got like 200 samples X 3000 RSVs table. I want to determine which RSV are differentially abundant across groups. My question is that should we feed raw 3000 RSVs  to DESeq2, or should we feed agglomerated ...
deseq2 dada2 written 14 months ago by blastzone.heimerdinger0 • updated 14 months ago by benjamin.j.callahan40

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