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Posts by edoardobertolini
... Hi! I have recently updated Salmon to the latest version (0.14.0) and I'm not anymore able to import Salmon outputs into R using the code > tximport(file, type = "salmon", txOut = TRUE, countsFromAbundance = > "no") This is the error that I get when I run the code above: > txi <- txim ...
... Hello! I'm trying to correlate the expression of PCGs and the adjacent lncRNAs within the same tissue using TPM values. My input is a matrix 496 TPM of one column where the first 256 rows are lncRNAs and the remaining are PCGs. Gene names are specified as rownames. What is the best approach? I tri ...
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