User: Phguardiol@aol.com

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Posts by Phguardiol@aol.com

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interaction analysis
... Dear R users I would like to have your opinion about the way (and the package that would be able to run this issue) to analyse gene expression data "around transcription factors": there are biological situations in which multiple factors (Transcription factors TF or other cofactors) are involved i ...
transcription written 9.8 years ago by Phguardiol@aol.com720
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Answer: A: Analysis of differentially regulated genes
... Dear all, I m not sure about what kind of normalization process can be used for methylation status analysis because of the potential distribution of these data... I would be curious to know what people from this group think about this point and if it could explain part of these results below... Tha ...
written 9.9 years ago by Phguardiol@aol.com720
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Comment: C: Cox Model
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written 10.7 years ago by Phguardiol@aol.com720
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sample size estimation in genome wide association studies / packages
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written 10.7 years ago by Phguardiol@aol.com720 • updated 10.7 years ago by alex lam RI310
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Comment: C: Question about a packages not yet in Bioconductor: AffyProbeMiner in R260 under
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written 11.0 years ago by Phguardiol@aol.com720
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Question about a packages not yet in Bioconductor: AffyProbeMiner in R260 under windows
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written 11.0 years ago by Phguardiol@aol.com720 • updated 11.0 years ago by rgentleman5.5k
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Comment: C: BioC] LIMMA: paired samples AND technical replicates
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written 11.1 years ago by Phguardiol@aol.com720
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"3D" hierarchical clustering question
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written 11.4 years ago by Phguardiol@aol.com720 • updated 11.4 years ago by Aedin Culhane510
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Farms library
... Hi, I ve been trying the new FARMS library to analyse primary signals of Affy U133A chips (using R2.4dev downloaded yesterday on a PC with winXPPro) which according to a recent publication in Bioinformatics is more accurate than RMA / gcRMA etc... Why is it that I get for more than 3/4 of the probe ...
gcrma process farms written 12.3 years ago by Phguardiol@aol.com720
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Answer: A: RMA-bimodality:
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written 12.4 years ago by Phguardiol@aol.com720

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