User: jxb.dev

jxb.dev • 20

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How does edgeR cpm function calculate log(CPM) values?

... Hello, I am knew to R and RNA-seq analysis and I am trying to understand how the cpm function in the edgeR package calculates log2(cpm). I have a count matrix in a DGEList object and I calculated the counts per million (CPM) and log2(CPM) as follow: > CPM <- cpm(x) > logCPM <- cpm(x, ...

edger cpm written 18 months ago by jxb.dev • 20 • updated 16 months ago by ftroot1010 • 20

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Popular Question 18 months ago, created a question with more than 1,000 views. For How does edgeR cpm function calculate log(CPM) values?