User: nikolaspapadop

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Posts by nikolaspapadop

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Comment: C: splatter simulating paths
... thank you for the verification! Maybe it can save someone else some time :) ...
written 12 months ago by nikolaspapadop10
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Answer: A: splatter simulating paths
... ok had to go into the code, but I think i figured it out: when you define path.from, you specify at which points the branch starts. The end point of the branch you defined is always the position you are at: path.from <- c(0, 1, 1, 2, 2) | | | | | 1 2 3 4 5 th ...
written 12 months ago by nikolaspapadop10
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splatter simulating paths
... I am trying to use splatter to simulate certain topologies - let's say I want to simulate a differentiation whose Newick tree would look like (B,(D,E)C)A; How do I implement this as a path for splatSimulate? It is not clear to me how to set up the path.from parameter. ...
single cell splatter written 12 months ago by nikolaspapadop10

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Scholar 12 months ago, created an answer that has been accepted. For A: splatter simulating paths

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