User: suranandbabu85

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Posts by suranandbabu85

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PCA analysis in R for 780 genes in 20 samples.
... Halo friends,     I have to do PCA analysis. I have 17 different samples (columns) and 730 genes for each samples (rows). I want to find how different they are from one another depending on the expression of all these genes. I would like to know the code in R and which package should i use for t ...
pca scree plot pca plot pca2go written 19 months ago by suranandbabu850 • updated 19 months ago by Steve Lianoglou12k
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Answer: A: Information regarding the (minimum) number of genes needed to analyse with DESeq
... Dear Ryan C Thompson,   Thank you so much. It is really helpful. ...
written 19 months ago by suranandbabu850
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Answer: A: Information regarding the (minimum) number of genes needed to analyse with DESeq
... Dear Ryan C Thompson,   Thank you so much. It is really helpful. ...
written 19 months ago by suranandbabu850
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Information regarding the (minimum) number of genes needed to analyse with DESeq2
... Dear Community,   I am new to do differential gene expression analysis uisng DESeq2. I have a set of 380 genes sequenced and i ran DESeq2 to find genes significantly expressed. However i read that DESeq2 is more suitable for whole genome expression analysis. Is it OK to use DESeq2 for targeted ge ...
deseq2 written 19 months ago by suranandbabu850

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