User: balin

gravatar for balin
balin0
Reputation:
0
Status:
New User
Location:
Last seen:
5 months, 1 week ago
Joined:
5 months, 1 week ago
Email:
n*******@graumannschaft.org

Posts by balin

<prev • 7 results • page 1 of 1 • next >
0
votes
1
answers
239
views
1
answers
Comment: C: R 3.5.0/Bioconductor version 3.6: OS-dependent behavior divergence for list conc
... On Wed, 2018-05-16 at 13:22 +0000, Martin Morgan [bioc] wrote: > Activity on a post you are following on support.bioconductor.org > User Martin Morgan wrote Comment: R 3.5.0/Bioconductor version 3.6: > OS-dependent behavior divergence for list concatenation of > SummarizedExperiment: > ...
written 5 months ago by balin0
0
votes
1
answers
239
views
1
answers
Comment: C: R 3.5.0/Bioconductor version 3.6: OS-dependent behavior divergence for list conc
... I don't ... loads without a hitch. ...
written 5 months ago by balin0
0
votes
1
answers
239
views
1
answers
Comment: C: R 3.5.0/Bioconductor version 3.6: OS-dependent behavior divergence for list conc
... > BiocInstaller::biocLite('BiocUpgrade') Error: Bioconductor version 3.6 cannot be upgraded with R version 3.5.0 ...
written 5 months ago by balin0
0
votes
1
answers
239
views
1
answers
Comment: C: R 3.5.0/Bioconductor version 3.6: OS-dependent behavior divergence for list conc
... > BiocInstaller::biocValid() [1] TRUE ...
written 5 months ago by balin0
0
votes
1
answers
239
views
1
answers
Comment: C: R 3.5.0/Bioconductor version 3.6: OS-dependent behavior divergence for list conc
... @Martin Morgan 1) I have not down anything out of the ordinary (other than maintaining my dev environment in switchr) - is switchr known to generate this kind of R/bioc mismatch? 2) isn't it strange that the apparently mismatched R/bioc combination does the concatenation just fine, but your matche ...
written 5 months ago by balin0
0
votes
1
answers
239
views
1
answers
Comment: C: R 3.5.0/Bioconductor version 3.6: OS-dependent behavior divergence for list conc
... Weirder by the minute ... here's my (again error free) reproduction including sessionInfo() ... I note a difference in SummarizedExperiment version (above 1.10., me 1.8), which BiocInstaller::biocLite(checkBuild=T) does not change ... where does that difference come from? > nrows <- 200; ncols ...
written 5 months ago by balin0
0
votes
1
answer
239
views
1
answer
R 3.5.0/Bioconductor version 3.6: OS-dependent behavior divergence for list concatenation of SummarizedExperiment
... Consider the following code: nrows <- 200; ncols <- 6 counts <- matrix(runif(nrows * ncols, 1, 1e4), nrows) rowRanges <- GenomicRanges::GRanges(rep(c("chr1", "chr2"), c(50, 150)), IRanges::IRanges(floor(runif(200, 1e5, 1e6)), width=100), strand=sample(c("+", ...
bug summarizedexperiment 3.5.0 written 5 months ago by balin0 • updated 5 months ago by James W. MacDonald48k

Latest awards to balin

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 361 users visited in the last hour