User: JYBH0

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JYBH00
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Posts by JYBH0

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Comment: C: Error downloading TCGA miRNA expression data
... Thanks that works!  I also have a solution for my original question. I just updated the TCGAbiolinks package by downloading the development version straight from github: devtools::install_github('BioinformaticsFMRP/TCGAbiolinks') ...
written 18 months ago by JYBH00
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Comment: C: Error downloading TCGA miRNA expression data
... Thanks for this solution. I tried it and I am able to download the miRseq data, but it seems like the data was curated in 2016 and has not been updated since? As I am able to download mRNA sequencing data from TCGAbiolinks, I wanted to compare their data and curatedTCCGAData's mRNA seq data, however ...
written 18 months ago by JYBH00
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Comment: C: Error downloading TCGA miRNA expression data
... Hi yes, sorry, I did try 'TCGA-OV' and it still gives the same error. Previously, I was also trying to download 'TARGET- AML' hence copy and pasted the wrong code. I will edit my main post. ...
written 18 months ago by JYBH00
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Error downloading TCGA miRNA expression data
... Hi, I am trying to download miRNA expression data for Ovarian Cancer using TCGAbiolinks' GDCquery. I used the commands below few months ago for Prostate cancer dataset and it was working then. It doesn't work for prostate cancer now either.  query <- GDCquery(project = "TCGA-OV", ...
tcgabiolinks written 18 months ago by JYBH00 • updated 18 months ago by Levi Waldron980

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