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Posts by c.martinezruiz
... Hello! I am running a gene expression analysis in a dataset where I have 3 castes and 14 tissues. The aim is to get pairwise comparisons between castes within tissues, but running a DESeq analysis including all data, to benefit from the gene information across tissues. The formula looks like this: ...
... Hello! I am using DESeq2 to analyse allele specifc expression in two different assays. I one of the assays I have six samples with no particular treatment, in the other assay I have 'colony' and 'body part' as blocking factors. Both assays have been analysed separately. My approach up until now ha ...
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