User: 261092095

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26109209510
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Posts by 261092095

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Installing GEOQuery failed with conda
... I rented a server, using ananconda, when I installed the GEOquery package, I made a mistake and asked for help. (it was installed and used, but it failed after restarting.) > source("http://bioconductor.org/biocLite.R") Bioconductor version 3.6 (BiocInstaller 1.28.0), ?biocLite for help A new v ...
geoquery anaconda libxml2 written 15 months ago by 26109209510 • updated 15 months ago by Martin Morgan ♦♦ 24k
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GEOquery install problem
... When I use the following code to install the 'GEOquery' package, the following error message always appears. When I select "y", I will always prompt the installation error, I hope to get your help! > source("http://bioconductor.org/biocLite.R") Bioconductor version 3.2 (BiocInstaller 1.20.3), ? ...
geoquery written 16 months ago by 26109209510
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Comment: C: The error when using beadarry and limma packages for analysing illumina chip
... Thank you very much, my question has been solved according to your suggestion. Your code is very concise to use. I hope I can be like you one day. ...
written 17 months ago by 26109209510
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Comment: C: The error when using beadarry and limma packages for analysing illumina chip
... Sorry, I am a newbie. I would also like to ask how I use the make.names function to change "group: SLE", "group: Healthy control of SLE" to "SLE" and "control" in the entire summaryData.norm dataset. ...
written 17 months ago by 26109209510 • updated 17 months ago by Gordon Smyth39k
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The error when using beadarry and limma packages for analysing illumina chip
... When I used beadarry and limma packages to perform differential gene expression analysis on the GSE49454 data set, I stuck to this group name and tried a lot of methods. url<-"ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE49nnn/GSE49454/matrix/" filenm<-"GSE49454_series_matrix.txt.gz" if(!file.ex ...
limma beadarray illumina written 17 months ago by 26109209510 • updated 17 months ago by Gordon Smyth39k

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