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User: Lakhansing Pardeshi

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Posts by Lakhansing Pardeshi

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Comment: C: Design formula in DeSeq2 to control for a variable
... Thank you for your help Michael. Yes, your interpretation is right. I went through the DESeq2 vignette as well as the help page for results function. Example 2 in the results help page is similar with the case we have in our experiment design. As I understand, the interaction term genotypetet90.medi ...
written 7 months ago by Lakhansing Pardeshi0
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Design formula in DeSeq2 to control for a variable
...  Hi all, We have performed a RNAseq experiment to understand the differential gene expression upon repression of a gene. We have generated a strain in which the gene of interest is placed under doxycycline (DOX) repressible promoter (genotype: tet90). When the DOX is added to medium, gene gets repr ...
deseq2 written 7 months ago by Lakhansing Pardeshi0 • updated 7 months ago by Michael Love22k

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