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User: Steffen Neumann

gravatar for Steffen Neumann
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New User
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Germany
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1 year, 6 months ago
Joined:
12 years, 11 months ago
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s*******@ipb-halle.de

Posts by Steffen Neumann

<prev • 4 results • page 1 of 1 • next >
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Export expressionSet to ArrayExpress "processed data"
... Hi, ArrayExpress allows to submit raw and processed data. The latter is "a two-dimensional spreadsheet files in tab-delimited text (.txt) format" [2]. Question: has anyone a minimalistic snippet of R, exemplifying how to produce/export such preprocessed data, something similar to: library(simp ...
simpleaffy arrayexpress expressionset tsv written 2.6 years ago by Steffen Neumann • 30
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Comment: C: Specify supported platforms for a package?
... Hi Zhang, On Sat, 2011-01-29 at 11:18 -0500, Sean Davis wrote: > > When developing a bioconductor package, how would one specify which > > platforms are supported, or unsupported? For example, linux and windows are > > supported, Mac is not supported. The Rdisop package had that ...
written 8.1 years ago by Steffen Neumann • 30
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Comment: C: unwrapdups for duplicate spots on custom array
... On Wed, 2006-03-08 at 15:40 -0500, Naomi Altman wrote: > What I would do is to normalize the data and then sort by geneid. > Once it is sorted, you can used spacing=1. Yup, that did it. > Does this make sense? It depends on whether the correlation is > related to distance (bad) or just ...
written 12.9 years ago by Steffen Neumann • 30
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unwrapdups for duplicate spots on custom array
... [This is a repost of a message sent 20hrs ago, which didn't appear on the list -- apologies if you received this twice.] Hi, I am currently working on the analysis of the SGED Study 073, which has been performed with the potato_10K_v3_sep14_2004 chip, http://www.tigr.org/tdb/potato/microarray_des ...
normalization written 13.0 years ago by Steffen Neumann • 30 • updated 13.0 years ago by Naomi Altman • 6.0k

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