User: nemanja.vucic

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Posts by nemanja.vucic

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Comment: C: DEXSeq analysis with large number of samples
... I already tried configuring BPPARAM and splitting analysis across many AWS instances but without much success, so I'll try diffSplice from limma. Thanks for a quick response. ...
written 16 months ago by nemanja.vucic10
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DEXSeq analysis with large number of samples
... Hi,  I am wondering if it is even possible to perform differential exon usage analysis with DEXSeq having a large number of samples, in my case almost 600? Samples are unequally divided between two conditions (1:10 ratio) and DEXSeq object contains almost 500K rows (exons) and 1.2K columns (samples ...
dexseq estimatedispersions written 16 months ago by nemanja.vucic10 • updated 16 months ago by Michael Love26k

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