User: joseluis.ruiz

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Posts by joseluis.ruiz

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diffBind report Fold scale
... Hi, so I have obtained using the package diffBind a set of regions with significant differential signal between 2 conditions. In the diffbind report, there is a column called "Fold". I guess this is like log2FoldChange in DESeq2, but I think I'm failing in the interpretation. Can anyone confirm if t ...
diffbind fold change written 9 months ago by joseluis.ruiz0 • updated 9 months ago by Rory Stark2.8k
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IRanges seqselect and subsetByRanges
... Hi, so I've been going through some code from a collaborator and I have found bot seqselect and subsetByRanges were removed from IRanges in newer versions. Does anyone know if there is any function replacing those? I would like to subset a ranges object having some starts and ends coordinates. Tha ...
iranges defunct written 14 months ago by joseluis.ruiz0 • updated 14 months ago by Michael Lawrence11k

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