User: tasnif.rahman

Reputation:
0
Status:
New User
Location:
Last seen:
9 hours ago
Joined:
3 months ago
Email:
t************@gmail.com

Posts by tasnif.rahman

<prev • 5 results • page 1 of 1 • next >
0
votes
1
answers
24
views
1
answers
Comment: C: Question: Pair-wise DESeq Analysis with 3 Factor Levels - RNA-Seq
... Hi Michael, thank you for your response. I have included the full coldata object. > as.data.frame(coldata)     Chirality           Cell.Type S11        NB               RUES2 S12        NB               RUES2 S13        NB               RUES2 S22        CW D5 Cardiac Mesoderm S23        CW D5 Ca ...
written 9 hours ago by tasnif.rahman0
0
votes
1
answer
24
views
1
answer
Question: Pair-wise DESeq Analysis with 3 Factor Levels - RNA-Seq
... [ Crossposted from Biostars: https://www.biostars.org/p/348420/#348421 ] Hello, very new to RNA-Sequencing, R and DESeq2 so the question might be too simple or repeated so I apologize in advance. I am working with 24 RNA-Sequencing samples, 8 conditions with 3 biological replicates for each. A par ...
rnaseq deseq2 design model multiple factor levels written 12 hours ago by tasnif.rahman0 • updated 12 hours ago by Michael Love20k
0
votes
1
answer
73
views
1
answer
Combining biological replicates from raw counts for use in differential gene expression/normalization (DESeq2 and edgeR)
... I am new to RNA-Seq, Linux and R. I have raw counts from single-end RNA-Seq data for 8 different treatment conditions, with 3 biological replicates for each. I used the featureCounts command on Rsubread and have the raw counts matrix for all 24 samples at the meta-feature(gene) level. I was wonderin ...
differential gene expression biologicalreplicates raw_counts written 9 weeks ago by tasnif.rahman0 • updated 9 weeks ago by James W. MacDonald48k
0
votes
1
answers
125
views
1
answers
Comment: C: Trouble Installing Bioconductor Basic Packages
... That worked. Thank you!  ...
written 3 months ago by tasnif.rahman0
1
vote
1
answer
125
views
1
answer
Trouble Installing Bioconductor Basic Packages
... I am using R version 3.4.4 and Bioconductor version 3.6 with BiocInstaller version 1.28.0 on a Virtual Machine with Windows 7 as the host OS and Linux Mint 19 as the guest OS using VirtualBox version 4.3.12. When I try to install the basic BioConductor Packages with biocLite(), the packages do not i ...
bioclite R linuxmint installation problem virtualbox written 3 months ago by tasnif.rahman0 • updated 3 months ago by James W. MacDonald48k

Latest awards to tasnif.rahman

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 253 users visited in the last hour