User: tasnif.rahman

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Posts by tasnif.rahman

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Combining biological replicates from raw counts for use in differential gene expression/normalization (DESeq2 and edgeR)
... I am new to RNA-Seq, Linux and R. I have raw counts from single-end RNA-Seq data for 8 different treatment conditions, with 3 biological replicates for each. I used the featureCounts command on Rsubread and have the raw counts matrix for all 24 samples at the meta-feature(gene) level. I was wonderin ...
differential gene expression biologicalreplicates raw_counts written 13 days ago by tasnif.rahman0 • updated 13 days ago by James W. MacDonald47k
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Comment: C: Trouble Installing Bioconductor Basic Packages
... That worked. Thank you!  ...
written 5 weeks ago by tasnif.rahman0
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Trouble Installing Bioconductor Basic Packages
... I am using R version 3.4.4 and Bioconductor version 3.6 with BiocInstaller version 1.28.0 on a Virtual Machine with Windows 7 as the host OS and Linux Mint 19 as the guest OS using VirtualBox version 4.3.12. When I try to install the basic BioConductor Packages with biocLite(), the packages do not i ...
bioclite R linuxmint installation problem virtualbox written 5 weeks ago by tasnif.rahman0 • updated 5 weeks ago by James W. MacDonald47k

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