User: jnoneill

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Posts by jnoneill

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Comment: C: VariantAnnotation error with readVcf after genotypeToSnpMatrix
... I get a similar error when trying to read in the first example file. > vcf1 <- readVcf(fl, "hg19") Error: scanVcf: scanVcf: scanTabix: '.SigArgs' is shorter than '.SigLength' says it should be path: /home/joneill/R/x86_64-pc-linux-gnu-library/3.3/VariantAnnotation/extdata/chr22.vcf.gz inde ...
written 12 months ago by jnoneill0
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Comment: C: Error using readVcf
... I get a similar error when trying to read in the first example file. > vcf1 <- readVcf(fl, "hg19") Error: scanVcf: scanVcf: scanTabix: '.SigArgs' is shorter than '.SigLength' says it should be path: /home/joneill/R/x86_64-pc-linux-gnu-library/3.3/VariantAnnotation/extdata/chr22.vcf.gz inde ...
written 12 months ago by jnoneill0

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