User: bzzandrew@interfree.it

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Posts by bzzandrew@interfree.it

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error asMatrixWeights in LimmaGUI
... Dear BioC users, I'm using LimmaGUI in R2.7 to analyse my microarray (miRNA exiqon v.10.0) experiments... But I'm not be able to solve this type of error that appearing constantly when I try to compute the linear model fit, particularly this error ever appears when I include in the model only the ...
microarray limmagui written 10.3 years ago by bzzandrew@interfree.it30
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reference design
... Dear Gordon, i performed 8 technical replicates with two color oligo array. Particularly i have 3 samples: MUT1, MUT2 and Reference (pool of wild type mice), then my experiments were MUT1 vs REFERENCE (4replicates with 2 dye swap) and the same for MUT2 (MUT2 vs REFERENCE). Then i analyzed with gene ...
limma limmagui oligo written 12.5 years ago by bzzandrew@interfree.it30 • updated 12.5 years ago by Naomi Altman6.0k
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parameterization or contrast matrix?
... Dear Gordon, i performed 8 technical replicates with two color oligo array. Particularly i have 3 samples: MUT1, MUT2 and Reference (pool of wild type mice), then my experiments were MUT1 vs REFERENCE (4replicates with 2 dye swap) and the same for MUT2 (MUT2 vs REFERENCE). Then i analyzed with gene ...
limma limmagui oligo written 12.5 years ago by bzzandrew@interfree.it30

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