User: ghn876

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ghn87610
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Posts by ghn876

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Comment: C: Cannot install flowViz package because dependency flowCore cannot be found, howe
... (Typed this before I saw the last two replies - thanks to both of you) I have found a workaround but I believe there is a genuine issue here. The way we have R set up is that there is directory created to install Bioconductor packages into, /opt/apps/x86_64/R/Bioconductor, and this is pointed to b ...
written 13 months ago by ghn87610
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Comment: C: Cannot install flowViz package because dependency flowCore cannot be found, howe
... When I start up R I type .libPaths('.') to set it to point only to my temp directory I am using to test the installation. If I then call .libPaths() it has the first entry as the current temp directory and the second as the location of the base and recommended R packages "R-3.5.1/lib/R/library", i.e ...
written 13 months ago by ghn87610
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Cannot install flowViz package because dependency flowCore cannot be found, however flowCore has just been installed.
... I am trying to install the flowViz package and it is saying that the dependency flowCore is not available even though it has just installed it. I created a new directory, set the .libPaths() to point only to there and then called source("https://bioconductor.org/biocLite.R") biocLite("flowViz") ...
flowcore flowviz package installation written 13 months ago by ghn87610 • updated 13 months ago by Martin Morgan ♦♦ 23k

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