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Posts by Irene
... I have data from two different Affymetrix platforms (Affymetrix hugene 2.1st and Affymetrix U133a). I’d like to compare the mean expression of the two samples (sample 1: Affymetrix hugene 2.1st, sample 2: Affymetrix U133a). Below you can find boxplots of the raw data (four boxplots of each platform ...
... What is the difference in annotation between the bioconductor packages pd.hugene.2.1.st and hugene21sttranscriptcluster.db? I have affymetrix data (hugene 2.1.st (sense target) 16-Array Plate). Before annotation, I performed RMA-preprocessing, which includes RMA-background correction + quantile-nor ...
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