User: galeoni

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galeoni0
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Posts by galeoni

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Comment: C: Rsamtools isSupplementary argument not working
... Hi Martin, I've just found that with a fresh restart of the system, the v. 1.33.7 worked perfectly!  Thanks again for the support, Galeoni   ...
written 9 months ago by galeoni0
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Comment: C: Rsamtools isSupplementary argument not working
... Thanks for the answer Martin and sorry for the delay in the reply, I've tried the new version as you were suggesting (v. 1.33.7) but the discrepancy in the counts is still present. As previously reported, the isSupplementary argument seems to not affect the counts of the output.  Thanks again for ...
written 9 months ago by galeoni0
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Rsamtools isSupplementary argument not working
... Hi to everyone,  I'm trying to use the Rsamtools (latest version: 1.33.5) package in order to filter some .bam files. I'm facing some problems with the isSupplementary  argument that should recognize reads flagged with the 2048 samflag within the bam file (https://broadinstitute.github.io/picard/e ...
rsamtools scanbamparam countbam issupplementary scanbamflag written 10 months ago by galeoni0 • updated 10 months ago by Martin Morgan ♦♦ 23k

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