Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
0
replies
70
views
Answer: Answer: Citation for edgeR user guide
1 day ago Gordon Smyth 50k
0
votes
0
replies
88
views
Answer: Answer: limma-voom: Calculate the log-fold change in gene expression within a sample
2 days ago Gordon Smyth 50k
1
vote
1
reply
327
views
Comment: Comment: FilterByExpr low counts with small sample size
4 days ago Gordon Smyth 50k
1
vote
1
reply
761
views
Comment: Comment: Why p value inconsistent when using different number of pathway score?
4 days ago Gordon Smyth 50k
2
votes
1
reply
761
views
Answer: Answer: Why p value inconsistent when using different number of pathway score?
4 days ago Gordon Smyth 50k
1
vote
0
replies
761
views
Comment: Comment: Why p value inconsistent when using different number of pathway score?
4 days ago Gordon Smyth 50k
0
votes
1
reply
152
views
Answer: Answer: RNAseq:Technical replicates from different batches
5 days ago Gordon Smyth 50k
0
votes
0
replies
128
views
Comment: Comment: Finding DEGs by using edgeR
6 days ago Gordon Smyth 50k
3
votes
1
reply
327
views
Answer: Answer: FilterByExpr low counts with small sample size
6 days ago Gordon Smyth 50k
0
votes
1
reply
91
views
Answer: Answer: How to make DGEList and design matrix by edgeR package
6 days ago Gordon Smyth 50k
0
votes
1
reply
128
views
Answer: Answer: Finding DEGs by using edgeR
6 days ago Gordon Smyth 50k
3
votes
0
replies
117
views
Answer: Answer: Log-cpm values from limma
6 days ago Gordon Smyth 50k
0
votes
1
reply
327
views
Comment: Comment: FilterByExpr low counts with small sample size
7 days ago Gordon Smyth 50k
0
votes
0
replies
1.2k
views
Comment: Comment: Batch correction and repeated measures
7 days ago Gordon Smyth 50k
0
votes
1
reply
245
views
Comment: Comment: Methylation Analysis experiment design using Limma
7 days ago Gordon Smyth 50k
0
votes
1
reply
245
views
Answer: Answer: Methylation Analysis experiment design using Limma
8 days ago Gordon Smyth 50k
1
vote
1
reply
853
views
Comment: Comment: Light difference when using coef vs omit a group when compare 3 groups.
8 days ago Gordon Smyth 50k
1
vote
1
reply
853
views
Comment: Comment: Light difference when using coef vs omit a group when compare 3 groups.
8 days ago Gordon Smyth 50k
1
vote
0
replies
160
views
Answer: Answer: Differentially expressed genes in monocle pseudotime
9 days ago Gordon Smyth 50k
0
votes
0
replies
285
views
Answer: Answer: permutation test in edgeR
10 days ago • updated 4 days ago Gordon Smyth 50k
0
votes
0
replies
320
views
Answer: Answer: Why is my gene not significantly differentially expressed?
10 days ago Gordon Smyth 50k
1
vote
2
replies
853
views
Comment: Comment: Light difference when using coef vs omit a group when compare 3 groups.
11 days ago • updated 10 days ago Gordon Smyth 50k
2
votes
1
reply
853
views
Answer: Answer: Light difference when using coef vs omit a group when compare 3 groups.
13 days ago Gordon Smyth 50k
0
votes
0
replies
145
views
Answer: Answer: Limma design matrix only showing 3/4 treatments?
19 days ago Gordon Smyth 50k
1
vote
1
reply
1.8k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
19 days ago Gordon Smyth 50k
1
vote
0
replies
1.8k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
19 days ago Gordon Smyth 50k
0
votes
0
replies
222
views
Comment: Comment: Regressing out batch effects
20 days ago Gordon Smyth 50k
1
vote
1
reply
1.8k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
20 days ago Gordon Smyth 50k
0
votes
0
replies
823
views
Comment: Comment: limma models out of memory issue on Slurm HPC
20 days ago Gordon Smyth 50k
0
votes
1
reply
413
views
Comment: Comment: Using a change in a continuous explanatory variable to test changes in gene expr
21 days ago • updated 20 days ago Gordon Smyth 50k
0
votes
1
reply
823
views
Comment: Comment: limma models out of memory issue on Slurm HPC
21 days ago Gordon Smyth 50k
1
vote
1
reply
413
views
Answer: Answer: Using a change in a continuous explanatory variable to test changes in gene expr
21 days ago • updated 20 days ago Gordon Smyth 50k
0
votes
1
reply
146
views
Answer: Answer: edgeR analysis: glm functions and offset matrix
22 days ago Gordon Smyth 50k
1
vote
0
replies
823
views
Comment: Comment: limma models out of memory issue on Slurm HPC
22 days ago Gordon Smyth 50k
2
votes
1
reply
823
views
Comment: Comment: limma models out of memory issue on Slurm HPC
22 days ago • updated 21 days ago Gordon Smyth 50k
0
votes
1
reply
823
views
Comment: Comment: limma models out of memory issue on Slurm HPC
22 days ago Gordon Smyth 50k
0
votes
1
reply
823
views
Comment: Comment: limma models out of memory issue on Slurm HPC
22 days ago Gordon Smyth 50k
0
votes
1
reply
823
views
Comment: Comment: limma models out of memory issue on Slurm HPC
22 days ago Gordon Smyth 50k
0
votes
1
reply
823
views
Comment: Comment: limma models out of memory issue on Slurm HPC
22 days ago Gordon Smyth 50k
0
votes
1
reply
823
views
Comment: Comment: limma models out of memory issue on Slurm HPC
22 days ago Gordon Smyth 50k
1
vote
1
reply
1.8k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
22 days ago Gordon Smyth 50k
0
votes
1
reply
392
views
Comment: Comment: Adjust RNA-seq counts (more than one batch variable) for plotting differentially
23 days ago Gordon Smyth 50k
0
votes
1
reply
392
views
Answer: Answer: Adjust RNA-seq counts (more than one batch variable) for plotting differentially
23 days ago Gordon Smyth 50k
1
vote
0
replies
1.8k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
25 days ago Gordon Smyth 50k
1
vote
2
replies
1.8k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
25 days ago Gordon Smyth 50k
1
vote
1
reply
1.8k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
25 days ago Gordon Smyth 50k
0
votes
0
replies
338
views
Comment: Comment: Differing results from plotMDS and PCAtools
26 days ago Gordon Smyth 50k
3
votes
1
reply
1.8k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
26 days ago • updated 23 days ago Gordon Smyth 50k
1
vote
0
replies
338
views
Comment: Comment: Differing results from plotMDS and PCAtools
26 days ago Gordon Smyth 50k
0
votes
0
replies
313
views
Comment: Comment: Doing comparison of RNA-seq data using EdgeR
26 days ago Gordon Smyth 50k
5,079 results • Page 1 of 102
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6