User: jingyaq

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jingyaq10
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6 months, 2 weeks ago
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j******@pennmedicine.upenn.edu

Posts by jingyaq

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Unable to reproduce DiffBind PCA plot
... I have a couple questions regarding the dba.plotPCA function in diffbind. The relevant figures are here: https://www.dropbox.com/sh/co3oywz8r745m8o/AACouCCG1q9UEyASR5igqXX9a?dl=0 I've been following the DiffBind vignette, using a dba.count object as input to dba.plotPCA. The resulting figure (see P ...
diffbind news written 5 months ago by jingyaq10
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dba.count binding matrix coordinates
... Hi, Thanks for this great package. I just have a question about the output of dba.count. I'm trying to generate a count matrix with dba.count, but noticed a strange mixup with the coordinates. Attached below is a toy example that I hope clearly shows the issue. consensus_peakset is a GRanges obje ...
diffbind written 6 months ago by jingyaq10 • updated 6 months ago by Rory Stark2.8k

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